Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp53P15975 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Usp53P15975 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Usp53P15975 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Usp53P15975 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Usp53P15975 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp53P15975 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp53P15975 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.34■□□□□ 0.37
Usp53P15975 Gm5312-201ENSMUST00000203728 547 ntBASIC17.34■□□□□ 0.37
Usp53P15975 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp53P15975 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp53P15975 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp53P15975 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Usp53P15975 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp53P15975 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp53P15975 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp53P15975 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp53P15975 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp53P15975 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp53P15975 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp53P15975 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp53P15975 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp53P15975 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp53P15975 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Usp53P15975 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp53P15975 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Usp53P15975 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp53P15975 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp53P15975 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp53P15975 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp53P15975 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.32■□□□□ 0.36
Usp53P15975 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp53P15975 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Asic1-205ENSMUST00000228185 1818 ntBASIC17.32■□□□□ 0.36
Usp53P15975 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp53P15975 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Usp53P15975 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp53P15975 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Usp53P15975 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp53P15975 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp53P15975 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp53P15975 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Usp53P15975 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp53P15975 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp53P15975 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp53P15975 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms