Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.08□□□□□ -0.32
UbbP0CG49 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.08□□□□□ -0.32
UbbP0CG49 Gm10175-202ENSMUST00000208752 441 ntBASIC13.08□□□□□ -0.32
UbbP0CG49 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
UbbP0CG49 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UbbP0CG49 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
UbbP0CG49 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.07□□□□□ -0.32
UbbP0CG49 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Gm10252-201ENSMUST00000209541 832 ntBASIC13.07□□□□□ -0.32
UbbP0CG49 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.07□□□□□ -0.32
UbbP0CG49 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Gm18622-201ENSMUST00000219361 595 ntBASIC13.07□□□□□ -0.32
UbbP0CG49 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.07□□□□□ -0.32
UbbP0CG49 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
UbbP0CG49 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
UbbP0CG49 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
UbbP0CG49 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UbbP0CG49 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UbbP0CG49 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.06□□□□□ -0.32
UbbP0CG49 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.06□□□□□ -0.32
UbbP0CG49 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.06□□□□□ -0.32
UbbP0CG49 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
UbbP0CG49 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UbbP0CG49 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.06□□□□□ -0.32
UbbP0CG49 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UbbP0CG49 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
UbbP0CG49 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UbbP0CG49 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UbbP0CG49 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UbbP0CG49 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
UbbP0CG49 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UbbP0CG49 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UbbP0CG49 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
UbbP0CG49 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.05□□□□□ -0.32
UbbP0CG49 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.05□□□□□ -0.32
UbbP0CG49 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UbbP0CG49 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UbbP0CG49 Efs-202ENSMUST00000227037 2540 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms