Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp6P0C0A3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp6P0C0A3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp6P0C0A3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chmp6P0C0A3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp6P0C0A3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp6P0C0A3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp6P0C0A3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Gm4899-201ENSMUST00000178708 719 ntBASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Gm8318-201ENSMUST00000182954 872 ntBASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp6P0C0A3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Gm43514-201ENSMUST00000198852 424 ntBASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp6P0C0A3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Psmb5-202ENSMUST00000227257 622 ntBASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp6P0C0A3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp6P0C0A3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms