Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.03□□□□□ -0.16
Sod1P08228 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.03□□□□□ -0.16
Sod1P08228 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.03□□□□□ -0.16
Sod1P08228 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.03□□□□□ -0.16
Sod1P08228 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.03□□□□□ -0.16
Sod1P08228 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sod1P08228 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sod1P08228 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sod1P08228 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sod1P08228 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sod1P08228 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sod1P08228 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sod1P08228 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sod1P08228 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sod1P08228 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.02□□□□□ -0.16
Sod1P08228 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.02□□□□□ -0.16
Sod1P08228 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.02□□□□□ -0.16
Sod1P08228 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Sod1P08228 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sod1P08228 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.02□□□□□ -0.17
Sod1P08228 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.02□□□□□ -0.17
Sod1P08228 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.02□□□□□ -0.17
Sod1P08228 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Gm46209-201ENSMUST00000217912 553 ntBASIC14.02□□□□□ -0.17
Sod1P08228 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.02□□□□□ -0.17
Sod1P08228 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.02□□□□□ -0.17
Sod1P08228 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.02□□□□□ -0.17
Sod1P08228 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sod1P08228 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sod1P08228 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Sod1P08228 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sod1P08228 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Gm4875-201ENSMUST00000118257 786 ntBASIC14.01□□□□□ -0.17
Sod1P08228 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.01□□□□□ -0.17
Sod1P08228 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Olfr286-202ENSMUST00000205305 969 ntBASIC14.01□□□□□ -0.17
Sod1P08228 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.01□□□□□ -0.17
Sod1P08228 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sod1P08228 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Asic1-205ENSMUST00000228185 1818 ntBASIC14.01□□□□□ -0.17
Sod1P08228 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sod1P08228 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.01□□□□□ -0.17
Sod1P08228 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sod1P08228 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sod1P08228 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Prob1-201ENSMUST00000097619 3021 ntBASIC14□□□□□ -0.17
Sod1P08228 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sod1P08228 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14□□□□□ -0.17
Sod1P08228 Gm37230-201ENSMUST00000194491 818 ntBASIC14□□□□□ -0.17
Sod1P08228 Gm45453-201ENSMUST00000211758 853 ntBASIC14□□□□□ -0.17
Sod1P08228 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sod1P08228 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sod1P08228 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14□□□□□ -0.17
Sod1P08228 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms