Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
TcraP01849 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.99□□□□□ -0.65
TcraP01849 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.99□□□□□ -0.65
TcraP01849 Gm7370-201ENSMUST00000219471 767 ntBASIC10.99□□□□□ -0.65
TcraP01849 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.99□□□□□ -0.65
TcraP01849 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TcraP01849 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TcraP01849 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TcraP01849 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
TcraP01849 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TcraP01849 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.98□□□□□ -0.65
TcraP01849 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TcraP01849 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.98□□□□□ -0.65
TcraP01849 Mir5130-201ENSMUST00000175160 84 ntBASIC10.98□□□□□ -0.65
TcraP01849 Gm9484-201ENSMUST00000195892 1159 ntBASIC10.98□□□□□ -0.65
TcraP01849 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.98□□□□□ -0.65
TcraP01849 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Gm18959-201ENSMUST00000208954 655 ntBASIC10.98□□□□□ -0.65
TcraP01849 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.98□□□□□ -0.65
TcraP01849 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
TcraP01849 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
TcraP01849 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
TcraP01849 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
TcraP01849 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TcraP01849 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.97□□□□□ -0.65
TcraP01849 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.97□□□□□ -0.65
TcraP01849 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TcraP01849 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TcraP01849 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TcraP01849 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.97□□□□□ -0.65
TcraP01849 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.97□□□□□ -0.65
TcraP01849 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.97□□□□□ -0.65
TcraP01849 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Gm29707-201ENSMUST00000196325 491 ntBASIC10.97□□□□□ -0.65
TcraP01849 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.97□□□□□ -0.65
TcraP01849 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TcraP01849 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms