Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.62□□□□□ -0.23
Abcd4O89016 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.62□□□□□ -0.23
Abcd4O89016 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.62□□□□□ -0.23
Abcd4O89016 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.62□□□□□ -0.23
Abcd4O89016 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.62□□□□□ -0.23
Abcd4O89016 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Abcd4O89016 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Abcd4O89016 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Abcd4O89016 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Abcd4O89016 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.61□□□□□ -0.23
Abcd4O89016 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.61□□□□□ -0.23
Abcd4O89016 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Abcd4O89016 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.61□□□□□ -0.23
Abcd4O89016 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Abcd4O89016 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Abcd4O89016 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Abcd4O89016 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Abcd4O89016 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.6□□□□□ -0.23
Abcd4O89016 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Abcd4O89016 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.6□□□□□ -0.23
Abcd4O89016 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.6□□□□□ -0.23
Abcd4O89016 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.6□□□□□ -0.23
Abcd4O89016 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Abcd4O89016 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Abcd4O89016 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.6□□□□□ -0.23
Abcd4O89016 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Abcd4O89016 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Abcd4O89016 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Abcd4O89016 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms