Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Syn1O88935 Shd-206ENSMUST00000225145 998 ntBASIC15.4■□□□□ 0.06
Syn1O88935 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Syn1O88935 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.4■□□□□ 0.06
Syn1O88935 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Syn1O88935 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Syn1O88935 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Syn1O88935 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Syn1O88935 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Syn1O88935 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Syn1O88935 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.39■□□□□ 0.05
Syn1O88935 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.39■□□□□ 0.05
Syn1O88935 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.39■□□□□ 0.05
Syn1O88935 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.39■□□□□ 0.05
Syn1O88935 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.39■□□□□ 0.05
Syn1O88935 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Syn1O88935 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Syn1O88935 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Syn1O88935 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.38■□□□□ 0.05
Syn1O88935 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Gm4875-201ENSMUST00000118257 786 ntBASIC15.38■□□□□ 0.05
Syn1O88935 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.38■□□□□ 0.05
Syn1O88935 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Syn1O88935 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.38■□□□□ 0.05
Syn1O88935 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Syn1O88935 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Syn1O88935 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Syn1O88935 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Syn1O88935 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.37■□□□□ 0.05
Syn1O88935 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Syn1O88935 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Syn1O88935 Gm12742-201ENSMUST00000117326 410 ntBASIC15.37■□□□□ 0.05
Syn1O88935 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Syn1O88935 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.37■□□□□ 0.05
Syn1O88935 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Gm27892-201ENSMUST00000185017 106 ntBASIC15.37■□□□□ 0.05
Syn1O88935 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Syn1O88935 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.37■□□□□ 0.05
Syn1O88935 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Syn1O88935 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms