Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Hdac3O88895 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hdac3O88895 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Hdac3O88895 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.46□□□□□ -0.25
Hdac3O88895 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.46□□□□□ -0.25
Hdac3O88895 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Gm8097-201ENSMUST00000117903 829 ntBASIC13.46□□□□□ -0.25
Hdac3O88895 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hdac3O88895 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.46□□□□□ -0.25
Hdac3O88895 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hdac3O88895 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hdac3O88895 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hdac3O88895 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hdac3O88895 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.46□□□□□ -0.26
Hdac3O88895 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hdac3O88895 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.45□□□□□ -0.26
Hdac3O88895 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.45□□□□□ -0.26
Hdac3O88895 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.45□□□□□ -0.26
Hdac3O88895 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hdac3O88895 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Hdac3O88895 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.45□□□□□ -0.26
Hdac3O88895 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Hdac3O88895 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Hdac3O88895 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Gm4535-201ENSMUST00000182274 558 ntBASIC13.45□□□□□ -0.26
Hdac3O88895 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.45□□□□□ -0.26
Hdac3O88895 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.45□□□□□ -0.26
Hdac3O88895 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Gm10355-201ENSMUST00000097146 517 ntBASIC13.45□□□□□ -0.26
Hdac3O88895 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.45□□□□□ -0.26
Hdac3O88895 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Hdac3O88895 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hdac3O88895 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.45□□□□□ -0.26
Hdac3O88895 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hdac3O88895 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.44□□□□□ -0.26
Hdac3O88895 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Hdac3O88895 Gm7153-201ENSMUST00000117092 455 ntBASIC13.44□□□□□ -0.26
Hdac3O88895 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.44□□□□□ -0.26
Hdac3O88895 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.44□□□□□ -0.26
Hdac3O88895 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.44□□□□□ -0.26
Hdac3O88895 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.44□□□□□ -0.26
Hdac3O88895 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Rps4l-201ENSMUST00000071745 943 ntBASIC13.44□□□□□ -0.26
Hdac3O88895 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hdac3O88895 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms