Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Gm7774-201ENSMUST00000200064 533 ntBASIC14.4□□□□□ -0.1
Best1O88870 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.4□□□□□ -0.1
Best1O88870 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Best1O88870 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Best1O88870 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.39□□□□□ -0.11
Best1O88870 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Best1O88870 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Gm5479-201ENSMUST00000160578 435 ntBASIC14.39□□□□□ -0.11
Best1O88870 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Best1O88870 Gm9824-201ENSMUST00000178707 561 ntBASIC14.39□□□□□ -0.11
Best1O88870 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Gm27430-201ENSMUST00000184585 107 ntBASIC14.39□□□□□ -0.11
Best1O88870 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Gm44333-201ENSMUST00000197168 107 ntBASIC14.39□□□□□ -0.11
Best1O88870 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.39□□□□□ -0.11
Best1O88870 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.39□□□□□ -0.11
Best1O88870 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Best1O88870 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Best1O88870 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.38□□□□□ -0.11
Best1O88870 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.38□□□□□ -0.11
Best1O88870 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Best1O88870 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Best1O88870 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Gm15693-201ENSMUST00000120470 637 ntBASIC14.38□□□□□ -0.11
Best1O88870 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.38□□□□□ -0.11
Best1O88870 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.38□□□□□ -0.11
Best1O88870 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.38□□□□□ -0.11
Best1O88870 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Best1O88870 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 BC037039-201ENSMUST00000192003 2205 ntBASIC14.37□□□□□ -0.11
Best1O88870 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.37□□□□□ -0.11
Best1O88870 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.37□□□□□ -0.11
Best1O88870 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.37□□□□□ -0.11
Best1O88870 Gm25948-201ENSMUST00000175334 112 ntBASIC14.37□□□□□ -0.11
Best1O88870 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.37□□□□□ -0.11
Best1O88870 Mir6956-201ENSMUST00000183598 62 ntBASIC14.37□□□□□ -0.11
Best1O88870 Gm18049-201ENSMUST00000208909 581 ntBASIC14.37□□□□□ -0.11
Best1O88870 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.37□□□□□ -0.11
Best1O88870 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Best1O88870 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms