Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tom1O88746 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.68■□□□□ 0.74
Tom1O88746 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC19.68■□□□□ 0.74
Tom1O88746 Gm15460-201ENSMUST00000118147 391 ntBASIC19.68■□□□□ 0.74
Tom1O88746 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tom1O88746 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC19.68■□□□□ 0.74
Tom1O88746 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC19.68■□□□□ 0.74
Tom1O88746 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tom1O88746 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.68■□□□□ 0.74
Tom1O88746 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tom1O88746 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tom1O88746 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
Tom1O88746 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.67■□□□□ 0.74
Tom1O88746 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 Gm5763-201ENSMUST00000155951 1530 ntBASIC19.67■□□□□ 0.74
Tom1O88746 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 Gm15808-201ENSMUST00000119046 604 ntBASIC19.67■□□□□ 0.74
Tom1O88746 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tom1O88746 Gm38266-201ENSMUST00000194931 421 ntBASIC19.67■□□□□ 0.74
Tom1O88746 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC19.67■□□□□ 0.74
Tom1O88746 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tom1O88746 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tom1O88746 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.67■□□□□ 0.74
Tom1O88746 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tom1O88746 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.66■□□□□ 0.74
Tom1O88746 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tom1O88746 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Mir8109-201ENSMUST00000184375 117 ntBASIC19.66■□□□□ 0.74
Tom1O88746 Gm7783-201ENSMUST00000204795 781 ntBASIC19.66■□□□□ 0.74
Tom1O88746 Gm40466-201ENSMUST00000212174 422 ntBASIC19.66■□□□□ 0.74
Tom1O88746 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tom1O88746 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Tom1O88746 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.65■□□□□ 0.74
Tom1O88746 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tom1O88746 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC19.65■□□□□ 0.74
Tom1O88746 Gm45880-201ENSMUST00000213041 853 ntBASIC19.65■□□□□ 0.74
Tom1O88746 AC132317.1-201ENSMUST00000227227 962 ntBASIC19.65■□□□□ 0.74
Tom1O88746 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tom1O88746 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tom1O88746 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.65■□□□□ 0.74
Tom1O88746 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tom1O88746 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tom1O88746 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Tom1O88746 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tom1O88746 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tom1O88746 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tom1O88746 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tom1O88746 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.64■□□□□ 0.74
Tom1O88746 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tom1O88746 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tom1O88746 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Tom1O88746 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tom1O88746 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC19.64■□□□□ 0.73
Tom1O88746 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tom1O88746 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.64■□□□□ 0.73
Tom1O88746 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.63■□□□□ 0.73
Tom1O88746 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.63■□□□□ 0.73
Tom1O88746 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tom1O88746 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Gm7993-201ENSMUST00000200970 1384 ntBASIC19.63■□□□□ 0.73
Tom1O88746 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Gm12176-201ENSMUST00000121420 875 ntBASIC19.63■□□□□ 0.73
Tom1O88746 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC19.63■□□□□ 0.73
Tom1O88746 Gm42442-201ENSMUST00000197951 1133 ntBASIC19.63■□□□□ 0.73
Tom1O88746 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tom1O88746 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tom1O88746 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tom1O88746 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tom1O88746 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms