Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.89□□□□□ -0.19
Cops4O88544 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Cops4O88544 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cops4O88544 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cops4O88544 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cops4O88544 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Cops4O88544 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Gm13836-201ENSMUST00000121159 501 ntBASIC13.88□□□□□ -0.19
Cops4O88544 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cops4O88544 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.88□□□□□ -0.19
Cops4O88544 Gm29518-201ENSMUST00000190858 372 ntBASIC13.88□□□□□ -0.19
Cops4O88544 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cops4O88544 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cops4O88544 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Cops4O88544 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cops4O88544 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cops4O88544 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cops4O88544 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cops4O88544 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Cops4O88544 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.87□□□□□ -0.19
Cops4O88544 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cops4O88544 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.87□□□□□ -0.19
Cops4O88544 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cops4O88544 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cops4O88544 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cops4O88544 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cops4O88544 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cops4O88544 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.86□□□□□ -0.19
Cops4O88544 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Cops4O88544 Gm23547-201ENSMUST00000158210 271 ntBASIC13.86□□□□□ -0.19
Cops4O88544 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.86□□□□□ -0.19
Cops4O88544 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Cops4O88544 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.86□□□□□ -0.19
Cops4O88544 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.86□□□□□ -0.19
Cops4O88544 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Cops4O88544 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Cops4O88544 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cops4O88544 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops4O88544 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.86□□□□□ -0.19
Cops4O88544 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops4O88544 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms