Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cops3O88543 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cops3O88543 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cops3O88543 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops3O88543 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.47□□□□□ -0.25
Cops3O88543 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cops3O88543 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cops3O88543 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cops3O88543 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Gm27704-201ENSMUST00000185094 107 ntBASIC13.47□□□□□ -0.25
Cops3O88543 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cops3O88543 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cops3O88543 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.47□□□□□ -0.25
Cops3O88543 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.47□□□□□ -0.25
Cops3O88543 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.47□□□□□ -0.25
Cops3O88543 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.47□□□□□ -0.25
Cops3O88543 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops3O88543 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Cops3O88543 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.46□□□□□ -0.25
Cops3O88543 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cops3O88543 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cops3O88543 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cops3O88543 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.46□□□□□ -0.25
Cops3O88543 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops3O88543 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cops3O88543 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cops3O88543 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.46□□□□□ -0.26
Cops3O88543 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops3O88543 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops3O88543 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cops3O88543 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cops3O88543 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.45□□□□□ -0.26
Cops3O88543 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.45□□□□□ -0.26
Cops3O88543 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.45□□□□□ -0.26
Cops3O88543 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cops3O88543 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.45□□□□□ -0.26
Cops3O88543 Mir7071-201ENSMUST00000184847 69 ntBASIC13.45□□□□□ -0.26
Cops3O88543 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cops3O88543 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.45□□□□□ -0.26
Cops3O88543 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms