Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.34□□□□□ -0.11
Vti1bO88384 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.34□□□□□ -0.11
Vti1bO88384 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.34□□□□□ -0.11
Vti1bO88384 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vti1bO88384 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Vti1bO88384 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.34□□□□□ -0.11
Vti1bO88384 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vti1bO88384 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.34□□□□□ -0.11
Vti1bO88384 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.34□□□□□ -0.11
Vti1bO88384 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1bO88384 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1bO88384 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1bO88384 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Vti1bO88384 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vti1bO88384 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Vti1bO88384 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vti1bO88384 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.33□□□□□ -0.12
Vti1bO88384 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Efs-202ENSMUST00000227037 2540 ntBASIC14.33□□□□□ -0.12
Vti1bO88384 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vti1bO88384 Gm12134-201ENSMUST00000122109 520 ntBASIC14.33□□□□□ -0.12
Vti1bO88384 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.33□□□□□ -0.12
Vti1bO88384 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.33□□□□□ -0.12
Vti1bO88384 Gm18622-201ENSMUST00000219361 595 ntBASIC14.33□□□□□ -0.12
Vti1bO88384 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.33□□□□□ -0.12
Vti1bO88384 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vti1bO88384 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vti1bO88384 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vti1bO88384 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.33□□□□□ -0.12
Vti1bO88384 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.32□□□□□ -0.12
Vti1bO88384 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.32□□□□□ -0.12
Vti1bO88384 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Vti1bO88384 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.32□□□□□ -0.12
Vti1bO88384 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.32□□□□□ -0.12
Vti1bO88384 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.32□□□□□ -0.12
Vti1bO88384 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vti1bO88384 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vti1bO88384 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.32□□□□□ -0.12
Vti1bO88384 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.32□□□□□ -0.12
Vti1bO88384 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vti1bO88384 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vti1bO88384 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Gm8097-201ENSMUST00000117903 829 ntBASIC14.31□□□□□ -0.12
Vti1bO88384 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.31□□□□□ -0.12
Vti1bO88384 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.31□□□□□ -0.12
Vti1bO88384 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vti1bO88384 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.31□□□□□ -0.12
Vti1bO88384 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vti1bO88384 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms