Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pdlim1O70400 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Gm44492-201ENSMUST00000197012 141 ntBASIC14.81□□□□□ -0.04
Pdlim1O70400 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Gm10175-201ENSMUST00000086013 645 ntBASIC14.81□□□□□ -0.04
Pdlim1O70400 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pdlim1O70400 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.81□□□□□ -0.04
Pdlim1O70400 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.8□□□□□ -0.04
Pdlim1O70400 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Gm16026-204ENSMUST00000162652 683 ntBASIC14.8□□□□□ -0.04
Pdlim1O70400 Gm17271-201ENSMUST00000165535 355 ntBASIC14.8□□□□□ -0.04
Pdlim1O70400 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim1O70400 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pdlim1O70400 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.8□□□□□ -0.04
Pdlim1O70400 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.8□□□□□ -0.04
Pdlim1O70400 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.8□□□□□ -0.04
Pdlim1O70400 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim1O70400 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim1O70400 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.79□□□□□ -0.04
Pdlim1O70400 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pdlim1O70400 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim1O70400 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Gm15427-201ENSMUST00000117288 531 ntBASIC14.78□□□□□ -0.04
Pdlim1O70400 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.78□□□□□ -0.04
Pdlim1O70400 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.78□□□□□ -0.04
Pdlim1O70400 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim1O70400 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms