Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gfi1bO70237 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gfi1bO70237 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.58□□□□□ -0.4
Gfi1bO70237 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Gfi1bO70237 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.58□□□□□ -0.4
Gfi1bO70237 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Gfi1bO70237 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.58□□□□□ -0.4
Gfi1bO70237 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gfi1bO70237 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gfi1bO70237 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gfi1bO70237 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.57□□□□□ -0.4
Gfi1bO70237 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.57□□□□□ -0.4
Gfi1bO70237 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Gm7284-201ENSMUST00000131667 944 ntBASIC12.57□□□□□ -0.4
Gfi1bO70237 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Gfi1bO70237 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Gfi1bO70237 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.57□□□□□ -0.4
Gfi1bO70237 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.57□□□□□ -0.4
Gfi1bO70237 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.57□□□□□ -0.4
Gfi1bO70237 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.57□□□□□ -0.4
Gfi1bO70237 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gfi1bO70237 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Gfi1bO70237 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Gfi1bO70237 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Gm14859-201ENSMUST00000117752 357 ntBASIC12.56□□□□□ -0.4
Gfi1bO70237 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.56□□□□□ -0.4
Gfi1bO70237 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Gfi1bO70237 Gm45328-201ENSMUST00000210942 917 ntBASIC12.56□□□□□ -0.4
Gfi1bO70237 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Gfi1bO70237 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms