Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.45□□□□□ -0.42
SncaO55042 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.45□□□□□ -0.42
SncaO55042 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.45□□□□□ -0.42
SncaO55042 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SncaO55042 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SncaO55042 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SncaO55042 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.45□□□□□ -0.42
SncaO55042 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SncaO55042 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SncaO55042 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.44□□□□□ -0.42
SncaO55042 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SncaO55042 Gm4459-201ENSMUST00000118750 468 ntBASIC12.44□□□□□ -0.42
SncaO55042 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SncaO55042 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SncaO55042 Gm27867-201ENSMUST00000184778 125 ntBASIC12.44□□□□□ -0.42
SncaO55042 Gm27704-201ENSMUST00000185094 107 ntBASIC12.44□□□□□ -0.42
SncaO55042 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Gm8655-201ENSMUST00000221159 852 ntBASIC12.44□□□□□ -0.42
SncaO55042 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.44□□□□□ -0.42
SncaO55042 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SncaO55042 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SncaO55042 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SncaO55042 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SncaO55042 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.43□□□□□ -0.42
SncaO55042 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SncaO55042 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.43□□□□□ -0.42
SncaO55042 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.43□□□□□ -0.42
SncaO55042 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.43□□□□□ -0.42
SncaO55042 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.43□□□□□ -0.42
SncaO55042 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SncaO55042 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SncaO55042 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.43□□□□□ -0.42
SncaO55042 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.43□□□□□ -0.42
SncaO55042 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SncaO55042 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms