Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf13O54965 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf13O54965 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.64□□□□□ -0.23
Rnf13O54965 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rnf13O54965 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Rnf13O54965 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Rnf13O54965 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.63□□□□□ -0.23
Rnf13O54965 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.63□□□□□ -0.23
Rnf13O54965 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf13O54965 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.63□□□□□ -0.23
Rnf13O54965 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.63□□□□□ -0.23
Rnf13O54965 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Rnf13O54965 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rnf13O54965 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf13O54965 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf13O54965 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf13O54965 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Rnf13O54965 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf13O54965 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Gm25745-201ENSMUST00000174945 133 ntBASIC13.62□□□□□ -0.23
Rnf13O54965 Mir7071-201ENSMUST00000184847 69 ntBASIC13.62□□□□□ -0.23
Rnf13O54965 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf13O54965 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf13O54965 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf13O54965 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf13O54965 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf13O54965 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf13O54965 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf13O54965 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf13O54965 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.61□□□□□ -0.23
Rnf13O54965 Gm15165-201ENSMUST00000118140 502 ntBASIC13.61□□□□□ -0.23
Rnf13O54965 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.61□□□□□ -0.23
Rnf13O54965 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf13O54965 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.61□□□□□ -0.23
Rnf13O54965 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf13O54965 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rnf13O54965 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Celf4-206ENSMUST00000224553 1729 ntBASIC13.61□□□□□ -0.23
Rnf13O54965 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf13O54965 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rnf13O54965 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf13O54965 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms