Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccr6O54689 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.6□□□□□ -0.39
Ccr6O54689 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccr6O54689 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ccr6O54689 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Ccr6O54689 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ccr6O54689 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Gm27011-201ENSMUST00000182352 972 ntBASIC12.6□□□□□ -0.39
Ccr6O54689 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccr6O54689 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccr6O54689 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccr6O54689 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Ccr6O54689 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccr6O54689 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccr6O54689 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccr6O54689 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccr6O54689 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccr6O54689 Matn2-206ENSMUST00000228570 2798 ntBASIC12.59□□□□□ -0.39
Ccr6O54689 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccr6O54689 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccr6O54689 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.59□□□□□ -0.39
Ccr6O54689 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccr6O54689 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccr6O54689 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccr6O54689 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccr6O54689 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccr6O54689 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.58□□□□□ -0.4
Ccr6O54689 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccr6O54689 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccr6O54689 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccr6O54689 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccr6O54689 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.58□□□□□ -0.4
Ccr6O54689 Gm18101-201ENSMUST00000215769 548 ntBASIC12.58□□□□□ -0.4
Ccr6O54689 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccr6O54689 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccr6O54689 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms