Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.93□□□□□ -0.18
Capn1O35350 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Gm26308-201ENSMUST00000157768 69 ntBASIC13.93□□□□□ -0.18
Capn1O35350 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.93□□□□□ -0.18
Capn1O35350 Chchd1-203ENSMUST00000224633 557 ntBASIC13.93□□□□□ -0.18
Capn1O35350 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.93□□□□□ -0.18
Capn1O35350 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.93□□□□□ -0.18
Capn1O35350 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Capn1O35350 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.93□□□□□ -0.18
Capn1O35350 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Capn1O35350 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Capn1O35350 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Capn1O35350 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Capn1O35350 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Capn1O35350 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Capn1O35350 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Capn1O35350 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.92□□□□□ -0.18
Capn1O35350 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.92□□□□□ -0.18
Capn1O35350 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.92□□□□□ -0.18
Capn1O35350 Gm17968-201ENSMUST00000194902 784 ntBASIC13.92□□□□□ -0.18
Capn1O35350 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Capn1O35350 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.92□□□□□ -0.18
Capn1O35350 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.92□□□□□ -0.18
Capn1O35350 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Capn1O35350 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.91□□□□□ -0.18
Capn1O35350 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Capn1O35350 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Capn1O35350 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Capn1O35350 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Capn1O35350 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.91□□□□□ -0.18
Capn1O35350 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Capn1O35350 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.91□□□□□ -0.18
Capn1O35350 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.91□□□□□ -0.18
Capn1O35350 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.91□□□□□ -0.18
Capn1O35350 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.91□□□□□ -0.18
Capn1O35350 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Capn1O35350 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Capn1O35350 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Capn1O35350 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Capn1O35350 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms