Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Cx3cl1O35188 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cx3cl1O35188 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cx3cl1O35188 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.12□□□□□ -0.15
Cx3cl1O35188 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.12□□□□□ -0.15
Cx3cl1O35188 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cx3cl1O35188 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cx3cl1O35188 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm15467-201ENSMUST00000120582 445 ntBASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.11□□□□□ -0.15
Cx3cl1O35188 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cx3cl1O35188 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Gm8000-201ENSMUST00000188378 592 ntBASIC14.1□□□□□ -0.15
Cx3cl1O35188 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms