Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scarb2O35114 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.03□□□□□ -0.16
Scarb2O35114 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.03□□□□□ -0.16
Scarb2O35114 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scarb2O35114 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Scarb2O35114 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Scarb2O35114 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scarb2O35114 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Scarb2O35114 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.02□□□□□ -0.16
Scarb2O35114 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Scarb2O35114 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.16
Scarb2O35114 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Scarb2O35114 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.02□□□□□ -0.16
Scarb2O35114 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.02□□□□□ -0.16
Scarb2O35114 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.02□□□□□ -0.16
Scarb2O35114 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scarb2O35114 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Scarb2O35114 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scarb2O35114 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scarb2O35114 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Scarb2O35114 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb2O35114 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.02□□□□□ -0.17
Scarb2O35114 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Scarb2O35114 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.02□□□□□ -0.17
Scarb2O35114 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.02□□□□□ -0.17
Scarb2O35114 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.02□□□□□ -0.17
Scarb2O35114 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb2O35114 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb2O35114 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Scarb2O35114 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Scarb2O35114 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scarb2O35114 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb2O35114 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb2O35114 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scarb2O35114 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
Scarb2O35114 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scarb2O35114 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Scarb2O35114 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.01□□□□□ -0.17
Scarb2O35114 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.01□□□□□ -0.17
Scarb2O35114 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.01□□□□□ -0.17
Scarb2O35114 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.01□□□□□ -0.17
Scarb2O35114 Gm9682-201ENSMUST00000197505 556 ntBASIC14.01□□□□□ -0.17
Scarb2O35114 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.01□□□□□ -0.17
Scarb2O35114 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.01□□□□□ -0.17
Scarb2O35114 Efs-202ENSMUST00000227037 2540 ntBASIC14.01□□□□□ -0.17
Scarb2O35114 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Scarb2O35114 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Scarb2O35114 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scarb2O35114 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb2O35114 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb2O35114 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scarb2O35114 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms