Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Gm13884-201ENSMUST00000118103 829 ntBASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chrna9G3X8Z7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Gm5864-201ENSMUST00000202263 970 ntBASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chrna9G3X8Z7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Mir8098-201ENSMUST00000184011 137 ntBASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Gm27300-201ENSMUST00000184085 97 ntBASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Gm27335-201ENSMUST00000184758 97 ntBASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chrna9G3X8Z7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Gm13597-201ENSMUST00000121239 375 ntBASIC16.09■□□□□ 0.17
Chrna9G3X8Z7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms