Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh11xF6ZNL5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Gm12260-201ENSMUST00000122447 411 ntBASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Gm27300-201ENSMUST00000184085 97 ntBASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Gm27335-201ENSMUST00000184758 97 ntBASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh11xF6ZNL5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh11xF6ZNL5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh11xF6ZNL5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms