Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc149F6V035 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.22■□□□□ 0.03
Ccdc149F6V035 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc149F6V035 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Gm43767-201ENSMUST00000198933 381 ntBASIC15.22■□□□□ 0.03
Ccdc149F6V035 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc149F6V035 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc149F6V035 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Gm9824-201ENSMUST00000178707 561 ntBASIC15.21■□□□□ 0.03
Ccdc149F6V035 Gm7063-201ENSMUST00000186840 981 ntBASIC15.21■□□□□ 0.03
Ccdc149F6V035 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.21■□□□□ 0.03
Ccdc149F6V035 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.21■□□□□ 0.03
Ccdc149F6V035 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc149F6V035 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ccdc149F6V035 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ccdc149F6V035 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc149F6V035 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.2■□□□□ 0.02
Ccdc149F6V035 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Celf4-206ENSMUST00000224553 1729 ntBASIC15.2■□□□□ 0.02
Ccdc149F6V035 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.2■□□□□ 0.02
Ccdc149F6V035 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.2■□□□□ 0.02
Ccdc149F6V035 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Mir7023-201ENSMUST00000185093 64 ntBASIC15.2■□□□□ 0.02
Ccdc149F6V035 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc149F6V035 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
Ccdc149F6V035 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms