Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Mir8102-201ENSMUST00000184148 139 ntBASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Gm27989-201ENSMUST00000184721 107 ntBASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Gm17837-201ENSMUST00000186435 985 ntBASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Gm38294-201ENSMUST00000192831 381 ntBASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hdm1E9Q9Q2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
R3hdm1E9Q9Q2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Gm27306-201ENSMUST00000183970 107 ntBASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
R3hdm1E9Q9Q2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Gm7653-201ENSMUST00000214567 508 ntBASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
R3hdm1E9Q9Q2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms