Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Mir692-1-201ENSMUST00000102263 109 ntBASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 AC121804.3-201ENSMUST00000223420 295 ntBASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Zc3h13E9Q784 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Gm5279-201ENSMUST00000199575 745 ntBASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC20.31■□□□□ 0.84
Zc3h13E9Q784 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h13E9Q784 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Rn7s1-201ENSMUST00000174924 300 ntBASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Rn7s2-201ENSMUST00000175032 300 ntBASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Gm26461-201ENSMUST00000175064 290 ntBASIC20.29■□□□□ 0.84
Zc3h13E9Q784 AC110817.1-201ENSMUST00000225706 605 ntBASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Gm18222-201ENSMUST00000202416 1387 ntBASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h13E9Q784 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Gm15393-201ENSMUST00000120499 219 ntBASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h13E9Q784 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Gm8463-201ENSMUST00000208573 613 ntBASIC20.27■□□□□ 0.84
Zc3h13E9Q784 AC140451.2-201ENSMUST00000228030 664 ntBASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.27■□□□□ 0.84
Zc3h13E9Q784 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms