Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube4aE9Q735 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube4aE9Q735 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ube4aE9Q735 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ube4aE9Q735 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4aE9Q735 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.94■□□□□ 0.46
Ube4aE9Q735 Gm2451-201ENSMUST00000199447 999 ntBASIC17.94■□□□□ 0.46
Ube4aE9Q735 Gm10290-201ENSMUST00000200451 999 ntBASIC17.94■□□□□ 0.46
Ube4aE9Q735 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.94■□□□□ 0.46
Ube4aE9Q735 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4aE9Q735 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Gm44344-201ENSMUST00000200287 129 ntBASIC17.93■□□□□ 0.46
Ube4aE9Q735 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Gm7775-201ENSMUST00000218871 853 ntBASIC17.93■□□□□ 0.46
Ube4aE9Q735 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.93■□□□□ 0.46
Ube4aE9Q735 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube4aE9Q735 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Gm24543-201ENSMUST00000103867 82 ntBASIC17.92■□□□□ 0.46
Ube4aE9Q735 Gm5866-201ENSMUST00000177881 973 ntBASIC17.92■□□□□ 0.46
Ube4aE9Q735 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms