Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Gm25406-201ENSMUST00000157599 105 ntBASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Gm7367-201ENSMUST00000057611 492 ntBASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc71lE9Q4T4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.83□□□□□ -0.51
Ccdc71lE9Q4T4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc71lE9Q4T4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc71lE9Q4T4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc71lE9Q4T4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc71lE9Q4T4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc71lE9Q4T4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Gm9172-201ENSMUST00000212092 954 ntBASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Gm18032-201ENSMUST00000222541 538 ntBASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc71lE9Q4T4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Gm14722-201ENSMUST00000118943 689 ntBASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Rprl3-201ENSMUST00000157400 290 ntBASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Gm25016-201ENSMUST00000158399 131 ntBASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc71lE9Q4T4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc71lE9Q4T4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms