Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Gm8399-201ENSMUST00000082300 1117 ntBASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Mir7654-201ENSMUST00000185082 70 ntBASIC20.66■□□□□ 0.9
Scaf11E9PZM7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC20.66■□□□□ 0.9
Scaf11E9PZM7 AC154171.1-201ENSMUST00000224610 643 ntBASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scaf11E9PZM7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Mir3102-201ENSMUST00000175555 104 ntBASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Gm44799-201ENSMUST00000207639 1202 ntBASIC20.65■□□□□ 0.9
Scaf11E9PZM7 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.65■□□□□ 0.9
Scaf11E9PZM7 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.65■□□□□ 0.9
Scaf11E9PZM7 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scaf11E9PZM7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC20.65■□□□□ 0.9
Scaf11E9PZM7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Scaf11E9PZM7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Scaf11E9PZM7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Mir1894-201ENSMUST00000122802 81 ntBASIC20.64■□□□□ 0.89
Scaf11E9PZM7 AA619741-201ENSMUST00000195095 646 ntBASIC20.64■□□□□ 0.89
Scaf11E9PZM7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 AC139580.1-202ENSMUST00000223574 928 ntBASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Gm11661-201ENSMUST00000121761 1327 ntBASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scaf11E9PZM7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Gm6244-201ENSMUST00000178732 841 ntBASIC20.63■□□□□ 0.89
Scaf11E9PZM7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Gm43179-201ENSMUST00000198797 275 ntBASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scaf11E9PZM7 Gm14660-201ENSMUST00000119809 575 ntBASIC20.62■□□□□ 0.89
Scaf11E9PZM7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf11E9PZM7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scaf11E9PZM7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scaf11E9PZM7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms