Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Gm28043E0CXC2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Gm4459-201ENSMUST00000118750 468 ntBASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Gm17971-201ENSMUST00000190239 806 ntBASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Gm34391-201ENSMUST00000203706 907 ntBASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Gm7506-201ENSMUST00000207758 815 ntBASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm28043E0CXC2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Gm28043E0CXC2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Gm28043E0CXC2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.08■□□□□ 0
Gm28043E0CXC2 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.08■□□□□ 0
Gm28043E0CXC2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.08■□□□□ 0
Gm28043E0CXC2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.08■□□□□ 0
Gm28043E0CXC2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm28043E0CXC2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28043E0CXC2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Gm28043E0CXC2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm28043E0CXC2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.06■□□□□ 0
Gm28043E0CXC2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.06■□□□□ 0
Gm28043E0CXC2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm28043E0CXC2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.06■□□□□ 0
Gm28043E0CXC2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.06■□□□□ 0
Gm28043E0CXC2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28043E0CXC2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms