Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Gm20628-201ENSMUST00000177363 3215 ntBASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Gm15393-201ENSMUST00000120499 219 ntBASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hfm1D3Z4R1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hfm1D3Z4R1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Gm15460-201ENSMUST00000118147 391 ntBASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Rassf8-202ENSMUST00000058538 1131 ntBASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hfm1D3Z4R1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Gm45667-201ENSMUST00000210380 1316 ntBASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hfm1D3Z4R1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Gm45331-201ENSMUST00000209868 554 ntBASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hfm1D3Z4R1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Gm12390-201ENSMUST00000117897 397 ntBASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Mir1982-201ENSMUST00000157368 74 ntBASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.74■□□□□ 0.91
Hfm1D3Z4R1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms