Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Gm21559-201ENSMUST00000220638 855 ntBASIC12.15□□□□□ -0.46
Gm12887B1AVM1 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Gm8587-201ENSMUST00000076538 843 ntBASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Gm12887B1AVM1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Gm12887B1AVM1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Gm12887B1AVM1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm12887B1AVM1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm11355-201ENSMUST00000121120 306 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm8825-201ENSMUST00000182565 998 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm4518-201ENSMUST00000182638 718 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm12887B1AVM1 Gm45058-201ENSMUST00000205810 766 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms