Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh2d4bA6X942 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.08■□□□□ 0.17
Sh2d4bA6X942 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh2d4bA6X942 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh2d4bA6X942 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Gm18889-201ENSMUST00000174284 929 ntBASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Gm22175-201ENSMUST00000175007 78 ntBASIC16.08■□□□□ 0.16
Sh2d4bA6X942 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.08■□□□□ 0.16
Sh2d4bA6X942 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Gm27430-201ENSMUST00000184585 107 ntBASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Gm44333-201ENSMUST00000197168 107 ntBASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh2d4bA6X942 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms