Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lnp1A0A1B0GSK3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm13036-201ENSMUST00000117799 748 ntBASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lnp1A0A1B0GSK3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Celf4-206ENSMUST00000224553 1729 ntBASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm11764-201ENSMUST00000120221 623 ntBASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.49□□□□□ -0.41
Lnp1A0A1B0GSK3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm27628-201ENSMUST00000184911 107 ntBASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm7787-201ENSMUST00000216858 688 ntBASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Mzt1-203ENSMUST00000227948 952 ntBASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms