Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cfap99A0A140LIX9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cfap99A0A140LIX9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cfap99A0A140LIX9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.95■□□□□ 0.46
Cfap99A0A140LIX9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Thap2-203ENSMUST00000218989 527 ntBASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.94■□□□□ 0.46
Cfap99A0A140LIX9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cfap99A0A140LIX9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms