Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm15173-201ENSMUST00000122049 433 ntBASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
1700028J19RikA0A0U1RP08 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm7153-201ENSMUST00000117092 455 ntBASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
1700028J19RikA0A0U1RP08 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Gm45167-201ENSMUST00000208007 322 ntBASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
1700028J19RikA0A0U1RP08 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
1700028J19RikA0A0U1RP08 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
1700028J19RikA0A0U1RP08 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
1700028J19RikA0A0U1RP08 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
1700028J19RikA0A0U1RP08 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
1700028J19RikA0A0U1RP08 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
1700028J19RikA0A0U1RP08 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
1700028J19RikA0A0U1RP08 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms