Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13n-1A0A0G2JEU8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm14494-201ENSMUST00000118786 435 ntBASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm18489-201ENSMUST00000172565 551 ntBASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm9682-201ENSMUST00000197505 556 ntBASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav13n-1A0A0G2JEU8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms