Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm10052-201ENSMUST00000168019 960 ntBASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm44430-201ENSMUST00000203376 995 ntBASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm45058-201ENSMUST00000205810 766 ntBASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm7729-201ENSMUST00000050143 801 ntBASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.4□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm13436-201ENSMUST00000120418 567 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm37055-201ENSMUST00000191866 133 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm18959-201ENSMUST00000208954 655 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm10566-201ENSMUST00000086739 996 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Matn2-206ENSMUST00000228570 2798 ntBASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm13559-201ENSMUST00000120476 863 ntBASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.38□□□□□ -0.59
Trav3n-3A0A0G2JEM0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms