Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trbv3A0A0A6YYE2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trbv3A0A0A6YYE2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trbv3A0A0A6YYE2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv3A0A0A6YYE2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm27011-201ENSMUST00000182352 972 ntBASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv3A0A0A6YYE2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms