Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm45328-201ENSMUST00000210942 917 ntBASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm17808-201ENSMUST00000200859 894 ntBASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm10252-201ENSMUST00000209541 832 ntBASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms