Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.95□□□□□ -0.5
Trav17A0A075B655 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav17A0A075B655 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Gm6345-202ENSMUST00000180900 204 ntBASIC11.94□□□□□ -0.5
Trav17A0A075B655 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.94□□□□□ -0.5
Trav17A0A075B655 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav17A0A075B655 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Gm44454-201ENSMUST00000198541 138 ntBASIC11.93□□□□□ -0.5
Trav17A0A075B655 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Grk6-207ENSMUST00000225925 2769 ntBASIC11.93□□□□□ -0.5
Trav17A0A075B655 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav17A0A075B655 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms