Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5493S4R2D1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5493S4R2D1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Gm5493S4R2D1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5493S4R2D1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5493S4R2D1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5493S4R2D1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm5493S4R2D1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Gm2274-201ENSMUST00000184539 609 ntBASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.77□□□□□ -0.37
Gm5493S4R2D1 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm5493S4R2D1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gm26039-201ENSMUST00000158152 144 ntBASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Gm5493S4R2D1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.75□□□□□ -0.37
Gm5493S4R2D1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gm5493S4R2D1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms