Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
H2afb3S4R1G7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Gm17807-201ENSMUST00000186869 298 ntBASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb3S4R1G7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb3S4R1G7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
H2afb3S4R1G7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb3S4R1G7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms