Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx6Q9R1R0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm25406-201ENSMUST00000157599 105 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm5682-201ENSMUST00000173402 505 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm8502-201ENSMUST00000185708 901 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm8510-201ENSMUST00000189202 895 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm2316-201ENSMUST00000190613 921 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm37684-201ENSMUST00000192779 355 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm9931-201ENSMUST00000193584 1185 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm37576-201ENSMUST00000194228 372 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm43084-201ENSMUST00000200696 947 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gm43125-201ENSMUST00000201724 730 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 AC116589.4-201ENSMUST00000222390 216 ntBASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx6Q9R1R0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx6Q9R1R0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm12151-201ENSMUST00000121374 290 ntBASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm8825-201ENSMUST00000182565 998 ntBASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm17968-201ENSMUST00000194902 784 ntBASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm6007-201ENSMUST00000208170 823 ntBASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 AC163038.1-201ENSMUST00000223632 1142 ntBASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm14005-208ENSMUST00000223654 681 ntBASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lhx6Q9R1R0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm6912-201ENSMUST00000117218 544 ntBASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm15427-201ENSMUST00000117288 531 ntBASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Rprl2-201ENSMUST00000157150 290 ntBASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm37845-201ENSMUST00000194977 355 ntBASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm9794-201ENSMUST00000202370 423 ntBASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lhx6Q9R1R0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms