Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Atp6ap1Q9R1Q9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm14140-201ENSMUST00000119999 995 ntBASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm1401-201ENSMUST00000122048 772 ntBASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Atp6ap1Q9R1Q9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Psmb5-202ENSMUST00000227257 622 ntBASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Atp6ap1Q9R1Q9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Atp6ap1Q9R1Q9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Gm44771-201ENSMUST00000206975 626 ntBASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Atp6ap1Q9R1Q9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms