Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nubp1Q9R060 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Gm18737-201ENSMUST00000173594 937 ntBASIC13.26□□□□□ -0.29
Nubp1Q9R060 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nubp1Q9R060 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.25□□□□□ -0.29
Nubp1Q9R060 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.25□□□□□ -0.29
Nubp1Q9R060 Mir7684-201ENSMUST00000183858 60 ntBASIC13.25□□□□□ -0.29
Nubp1Q9R060 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm5708-201ENSMUST00000196289 886 ntBASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm44387-201ENSMUST00000196298 145 ntBASIC13.25□□□□□ -0.29
Nubp1Q9R060 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm20553-201ENSMUST00000204205 844 ntBASIC13.25□□□□□ -0.29
Nubp1Q9R060 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.25□□□□□ -0.29
Nubp1Q9R060 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms