Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1aQ9QWF0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1aQ9QWF0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1aQ9QWF0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1aQ9QWF0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1aQ9QWF0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chaf1aQ9QWF0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chaf1aQ9QWF0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Gm12497-201ENSMUST00000138778 237 ntBASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chaf1aQ9QWF0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Gm8097-201ENSMUST00000117903 829 ntBASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chaf1aQ9QWF0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chaf1aQ9QWF0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Chaf1aQ9QWF0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1aQ9QWF0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1aQ9QWF0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Chaf1aQ9QWF0 Gm12644-201ENSMUST00000119935 606 ntBASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.83■□□□□ 0.28
Chaf1aQ9QWF0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms