Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Gm24841-201ENSMUST00000158676 357 ntBASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Gm18671-201ENSMUST00000214826 683 ntBASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco4Q9JIS3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Acot6-202ENSMUST00000222921 3622 ntBASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco4Q9JIS3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.1□□□□□ -0.47
Smco4Q9JIS3 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.1□□□□□ -0.47
Smco4Q9JIS3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.1□□□□□ -0.47
Smco4Q9JIS3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.09□□□□□ -0.47
Smco4Q9JIS3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms