Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Gm11745-201ENSMUST00000121669 448 ntBASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ripk4Q9ERK0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Gm13616-201ENSMUST00000120600 222 ntBASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ripk4Q9ERK0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Gm14057-201ENSMUST00000120631 482 ntBASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.29■□□□□ 0.52
Ripk4Q9ERK0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Gm10499-201ENSMUST00000174094 934 ntBASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Mir6990-201ENSMUST00000183724 91 ntBASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Gm2272-201ENSMUST00000194903 582 ntBASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms