Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Gm24644-201ENSMUST00000157114 139 ntBASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Gm24196-201ENSMUST00000179161 110 ntBASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.88■□□□□ 0.29
Upf1Q9EPU0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.88■□□□□ 0.29
Upf1Q9EPU0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Gm29787-201ENSMUST00000222129 849 ntBASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Upf1Q9EPU0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Gm17795-201ENSMUST00000214505 757 ntBASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Upf1Q9EPU0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Gm16177-201ENSMUST00000120728 718 ntBASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Gm43118-201ENSMUST00000199149 775 ntBASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upf1Q9EPU0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms